@Cybercow and others,
I made some progress today, but am stopping for the night before I am completely done with everything.
I put a 74HC74 into my clock signal pathway so that I could improve the clock to BBD. I started seeing output from the BBD that matched the input - but I don't have dual channel so I have no idea if it was truly delayed.
[long narrative version that mostly highlights my "knowledge"]
I cleaned up my timer and upped the frequency (i.e. got rid of the 27k/1k resistor pair I was using to get near 50% duty cycle) so that I had a 144kHz timer (10k/10k timer resistors) and a solid 72kHz clock to my BBD sub-board. But inconsistent output. Most notably, I was not seeing output from the op-amp going in to the timer. Now I happen to be powering this with a breadboard that has a 9V "starve"circuit that is feeding a 78L05 to regulate down to 5V to pass into the BBD board. And I messed with the power and I could see the OpAmp suddenly generate output as I dropped the power, and when I had output from opamp, I also have matching output from BBD. I switched my oscilloscope to DC mode, and re-read the BBD docs which show that the circuit wants a small signal (0.44Vpp max) vs the 1 and 2V signal I was testing with and it wants the OpAmp output biased to 3.2V, which I was most definitely NOT giving it.
My biased signal was only really showing output at 1.5ish V for the Vavg on the op amp output, although the Non-inv input pin (I think I have that correct) was otherwise biasing OK. So I pondered and realized that my little signal generator runs 0 to +V, not -V to +V, and I didn't put a coupling capacitor on this. Soo I begin to see where I am quite feeding the signal incorrectly, and I think this is why my op amp output looks clipped (duh), and when I move the voltage up I am just clipping (flatlining) the OpAmp output. I'm going to park for the night, though, but at least I know what to do next. Now I actually have no idea if my original timing circuit was a problem, but I am going to leave that alone, since the flip-flop divider definitely sharpens the clock shape and guarantees the right duty cycle.
TLDR
I was sending an overpowered signal that was DC biased into the op amp before the SSI2100, which was causing the OpAmp to clip instead of generating a suitable output. When I accidentally generated an output from the OpAmp that was "in-range", I could see a signal coming out of the BBD. Next step is putting a coupling capacitor on my test signal and seeing if I can get the OpAmp functioning as expected.