There’s no difference in the circuits. What you’re probably hearing is differences in component values. Potentiometers can have tolerances up to +/-20%. This doesn’t matter much for voltage dividers, but when they are used as variable resistors, that can certainly have an impact.
@vigilante398 there are discrepancies between the BOM and the silkscreen (e.g., two 1k5 resistors spec’d in the BOM, but nothing on the board). Should it be built to the values indicated on the board?
An option to try is a crude noise gate with series antiparallel diodes and a parallel resistor with a divider to set the loss. You’d of course be introducing crossover distortion, but it may be worth trying.
Does your design need to consider trace impedance, EMF radiation, differential signaling, and return paths? Otherwise don’t worry about it. Just don’t have isolated copper pours hanging out alone.