Hmmm.
No worries about posting brother, just taking me a little time to do some reading and try to apply vague notions of ideas with actual theory.
So, let's talk about that bias point. You're taking that measurement at 2D, right? My thought:
My first idea here is that you might be experiencing an issue with bandwidth. The presence of too much bass in your signal might be overloading Q2 and causing the gating behavior you're talking about.
When measuring the voltage at that point while switching out that cap on a rotary switch, you're not really doing anything that would directly impact your bias. At least not from a DC voltage standpoint.
That switch acts as part of a high-pass filter, and by increasing the capacitance one decreases the cutoff frequency. THis will effect your guitar signal, but it also, importantly, will effect *noise*. EMF, 60 cycle hum, etc.
The increased presence of bass signal will absolutely have an impact on your Q2 Jfet when applied to the gate.
If I have my theory correct here: Increased voltage at the gate of an N-channel Jfet will increase the N-channel width, reducing resistance across the Source and Drain, which will cause the voltage at 2D to drop.
If this is the case, then switching between 68 and 47 nF isn't going to do much to additionally filter out low end. We're talking maybe another 1.5hZ of filtering, while still under 5Hz. At this point, I'd say go lower. Way lower. Like 1/10th the value, 4.7nF or even lower. 4.7nf will get you down to 25hz at least.
But...there's always another option here. If you were to do this:
View attachment 86476
Leave everything else as is. Wire C7 directly to terminal 1 of the FAC. At that point, your maximum capacitance will be a hair over 0.98nF, and your bass cutoff will be about 140hz.
I dunno too much about filtering before gain stages. Not my area of expertise. But this could very well have been the intent and the guy who put together the schematic briefly mixed up his series and parallel capacitance laws. Or maybe he meant for it to "break" at more extreme settings. Can't say for sure.