I have built a few FV-1 effects and the noise floor is good on all of them, but I have not built any of the PCB FV-1 boards that use the toggle to switch between three programs. There are two TL072 chips on your board, and it looks like R9 and R10 should connect to pin 6 for one of those chips. Make sure you were not testing the wrong TL072 when you were checking for continuity.
Try running the board from a 9v battery and see if your noise level improves. I have had some pedals that were much more sensitive to noise from my power supply and that might be the case here.