This is how I would add a deep switch, that way I could have it original or deep tone if I wanted to.
I would not mount C2 on the PCB, I would run 2 wires from the PCB holes for C2 to a DPDT switch and then mount the capacitors on the switch.
It would be a lot easier to change the caps on the switch if you want to keep trying different values.
There is a way to use a DPDT ON-ON-ON switch so you can have 3 different settings if you wanted Normal-Deep-Bass settings which I have used in the past, It gave me normal for guitar, deep for a deeper tone on guitar and Bass for Bass guitar.
If you would like to see it let me know, I would have to find it on my computer, I'm to tired now at 3.30am to look for it.
Cheers
Mick
EDIT: I couldn't help myself so I drew the 3 way switching circuit up in KiCad just to show everyone, I have been meaning to start a new thread just for mods and when I do I will place all this in there as well.